Biochemical Space: A Framework for Formal Description and Annotation of Complex Biological Processes
| Authors | |
|---|---|
| Year of publication | 2017 |
| Type | Appeared in Conference without Proceedings |
| MU Faculty or unit | |
| Citation | |
| Description | Biochemical Space is a novel framework for practical description of complex biological processes. It is developed as a part of Comprehensive Modeling Platform - a web-based platform for modeling and analysis of biological processes. In the context of the platform, Biochemical Space binds complicated quantitative models with an easy-to-understand, yet formal and compact qualitative description. It allows us to specify formal and well-annotated reaction networks of chemical entities and elemental reactions onto which the mathematical models are projected. Biochemical Space is supported by Biochemical Space Language that combines state-of-the-art rule-based techniques with metadata formats developed in well-known annotation databases. |
| Related projects: |