GLASS

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This publication doesn't include Institute of Computer Science. It includes Central European Institute of Technology. Official publication website can be found on muni.cz.

Authors	PÁL Karol BYSTRÝ Vojtěch REIGL Tomáš DEMKO Martin KREJČÍ Adam TOULOUMENIDOU T. STALIKA E. TICHÝ Boris GHIA P. STAMATOPOULOS K. POSPÍŠILOVÁ Šárka MALČÍKOVÁ Jitka DARZENTAS Nikos
Year of publication	2017
MU Faculty or unit	Central European Institute of Technology
Web	zdrojovy kod
Description	Motivation: Sanger sequencing is still being employed for sequence variant detection by many laboratories, especially in a clinical setting. However, chromatogram interpretation often requires manual inspection and in some cases, considerable expertise. Results: We present GLASS, a web-based Sanger sequence trace viewer, editor, aligner and variant caller, built to assist with the assessment of variations in 'curated' or user-provided genes. Critically, it produces a standardized variant output as recommended by the Human Genome Variation Society.
Related projects:	CERIT Scientific Cloud Centrum kompetence pro molekulární diagnostiku a personalizovanou medicínu Velká infrastruktura CESNET MEDGENET - Medical genomics and epigenomics network Národní centrum lékařské genomiky Encyklopedie CLL podskupin: unikátní znalostní databáze vybavená bioinformatickými nástroji použitelná v personalizované biomedicíně a klinické praxi CEITEC 2020 Nové přístupy ve výzkumu, diagnostice a terapii hematologických malignit IV