Exploring Trends in Quality of Biomacromolecular Structure Data

Varování

Publikace nespadá pod Ústav výpočetní techniky, ale pod Středoevropský technologický institut. Oficiální stránka publikace je na webu muni.cz.

Autoři	HORSKÝ Vladimír BENDOVÁ Veronika SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav
Rok publikování	2017
Druh	Konferenční abstrakty
Fakulta / Pracoviště MU	Středoevropský technologický institut
Citace
Popis	We have performed wide analysis of trends in quality and size of biomacromolecules and their ligands. 88 factors that quantified quality and metadata properties of biomacromolecular complexes have been considered. Source data for the analysis came from the Protein Data Bank database. The state of quality of ligands was sourced from the ValidatorDB database that was developed by our team. Some trends were expected to exist (e.g., newer structures have better quality). Other trends came as a surprise to us (e.g., ligand quality is stagnant at best, currently utilised structure validation methods do not validate ligands well). All trends that have been discovered in the analysis are openly available in the ValTrendsDB database.
Související projekty:	CEITEC 2020 Statistické a deterministické modelování