doc. RNDr. Petr Holub, Ph.D.

2024

• Getting your DUCs in a row - standardising the representation of Digital Use Conditions

  JEANSON Francis GIBSON Spencer J ALPER Pinar BERNIER Alexander WOOLLEY J Patrick MIETCHEN Daniel STRUG Andrzej BECKER Regina KAMERLING Pim GONZALEZ Maria del Carmen Sanchez MAH Nancy NOVAKOWSKI Ann WILKINSON Mark D BENHAMED Oussama Mohammed LANDI Annalisa KROG Georg Philip MÜLLER Heimo RIAZ Umar VEAL Colin HOLUB Petr VAN ENCKEVORT Esther BROOKES Anthony J

  Article in Periodical

  SCIENTIFIC DATA, year: 2024, volume: 11, edition: 1, DOI

• Interpreting convolutional neural network classifiers applied to laser-induced breakdown optical emission spectra

  KÉPEŠ Erik VRÁBEL Jakub BRÁZDIL Tomáš HOLUB Petr POŘÍZKA Pavel KAISER Jozef

  Article in Periodical

  Talanta, year: 2024, volume: 266, edition: 124946, DOI

• Leveraging BBMRI-ERIC for XAI Research in Digital Pathology

  HOLUB Petr

  Year: 2024, type:

• Proposal for a framework of contextual metadata in selected research infrastructures of the life sciences and the social sciences & humanities

  OHMANN Christian PANAGIOTOPOULOU Maria CANHAM Steve HOLUB Petr MAJCEN Kurt SAUNDERS Gary FRATELLI Maddalena TANG Jing GRIBBON Philip KARKI Reagon KLEEMOLA Mari MOILANEN Katja BROEDER Daan DAELEMANS Walter FIVEZ Pieter

  Article in Periodical

  International Journal of Metadata, Semantics and Ontologies, year: 2024, volume: 16, edition: 4

• Toward a common standard for data and specimen provenance in life sciences

  WITTNER Rudolf HOLUB Petr MASCIA Cecilia FREXIA Francesca MÜLLER Heimo PLASS Markus ALLOCCA Clare BETSOU Fay BURDETT Tony CANCIO Ibon CHAPMAN Adriane CHAPMAN Martin COURTOT Mélanie CURCIN Vasa EDER Johann ELLIOT Mark EXTER Katrina GOBLE Carole GOLEBIEWSKI Martin KISLER Bron KREMER Andreas LEO Simone LIN-GIBSON Sheng MARSANO Anna MATTAVELLI Marco MOORE Josh NAKAE Hiroki PERSEIL Isabelle SALMAN Ayat SLUKA James SOILAND-REYES Stian STRAMBIO-DE-CASTILLIA Caterina SUSSMAN Michael SWEDLOW Jason R ZATLOUKAL Kurt GEIGER Jörg

  Article in Periodical

  LEARNING HEALTH SYSTEMS, year: 2024, volume: 8, edition: 1, DOI

2023

• "Be Sustainable Recommendations" for FAIR Resources in Life Sciences research: EOSC-Life's Lessons

  DAVID Romain RYBINA Arina BUREL Jean-Marie HERICHE Jean-Karim AUDERGON Pauline BOITEN Jan-Willem COPPENS Frederik CROCKETT Sara KATRINA Exter FAHRENER Sven FRATELLI Maddalena GOBLE Carole GORMANNS Philipp GRANTNER Tobias GRUNING Bjorn GURWITZ Kim Tamara HANCOCK John HARMSE Henriette HOLUB Petr JUTY Nick KARNBACH Geoffrey KAROUNE Emma KEPPLER Antje KLEMEIER Jessica LANCELOTTI Carla LEGRAS Jean-Luc LISTER L Allyson DARIO Livio Longo LUDWIG Rebecca MADON Benedicte MASSIMI Marzia MATSER Vera MATTEONI Rafaele MAYRHOFER Michaela Th CHRISTIAN Ohmann PANAGIOTOPOULOU Maria PARKINSON Helen PERSEIL Isabelle PFANDER Claudia PIERUSCHKA Roland RAESS Michael RAUBER Andreas RICHARD Audrey S ROMANO Paolo ROSATO Antonio SANCHEZ-PLA Alex SANSONE Susanna-Assunta SARKANS Ugis SERRANO-SOLANO Beatriz TANG Jing TANOLI Ziaurrehman TEDDS Jonathan WAGENER Harald WEISE Martin WESTERHOFF Hans V WITTNER Rudolf EWBANK Jonathan BLOMBERG Niklas GRIBBON Philip

  Article in Periodical

  EMBO Journal, year: 2023

• AI for Life: Trends in Artificial Intelligence for Biotechnology

  HOLZINGER Andreas KEIBLINGER Katharina HOLUB Petr ZATLOUKAL Kurt MÜLLER Heimo

  Article in Periodical

  NEW BIOTECHNOLOGY, year: 2023, volume: 74, edition: 1, DOI

• BIBBOX, a FAIR toolbox and App Store for Life Science Research

  MÜLLER Heimo LOPES-DIAS Catarina HOLUB Petr PLASS Markus JUNGWIRTH Emilian REIHS Robert TORKE Paul R MALATRAS Apostolos BERGER Anouk COOMBS Heather DILLNER Joakim MERINO-MARTINEZ Roxana

  Article in Periodical

  NEW BIOTECHNOLOGY, year: 2023, volume: 77, DOI

• Privacy risks of whole-slide image sharing in digital pathology

  HOLUB Petr MÜLLER Heimo BÍL Tomáš PIREDDU Luca PLASS Markus PRASSER Fabian SCHLÜNDER Irene ZATLOUKAL Kurt NENUTIL Rudolf BRÁZDIL Tomáš

  Article in Periodical

  Nature Communications, year: 2023, volume: 14, edition: 2577, DOI

• Provenance of specimen and data – A prerequisite for AI development in computational pathology

  PLASS Markus WITTNER Rudolf HOLUB Petr FREXIA Francesca MASCIA Cecilia GALLO Matej MÜLLER Heimo GEIGER Jörg

  Article in Periodical

  NEW BIOTECHNOLOGY, year: 2023, volume: 78, edition: DEC, DOI